Publications

2013

CSCI 578–Software Architectures Fall 2013 Course Project

C Kesselman
2013

2012

Collaborative Research: Conceptualizing an Institute for Empowering Long Tail Research

Carl F Kesselman
NSF Award Number 1216726. Directorate for Computer and Information Science …, 2012

Next generation sequence analysis and computational genomics using graphical pipeline workflows

Federica Torri, Ivo D Dinov, Alen Zamanyan, Sam Hobel, Alex Genco, Petros Petrosyan, Andrew P Clark, Zhizhong Liu, Paul Eggert, Jonathan Pierce, James A Knowles, Joseph Ames, Carl Kesselman, Arthur W Toga, Steven G Potkin, Marquis P Vawter, Fabio Macciardi
Genes 3 (3), 545-575, 2012

A resiliency model for high performance infrastructure based on logical encapsulation

James J Moore, Carl Kesselman
Proceedings of the 21st international symposium on High-Performance Parallel …, 2012

A system architecture for sharing de-identified, research-ready brain scans and health information across clinical imaging centers

Ann L Chervenak, Theo GM Van Erp, Carl Kesselman, Mike D’Arcy, Janet Sobell, David Keator, Lisa Dahm, Jim Murry, Meng Law, Anton Hasso, Joseph Ames, Fabio Macciardi, Steven G Potkin
Studies in health technology and informatics 175, 19, 2012

A flexible, open, decentralized system for digital pathology networks

Robert Schuler, David E Smith, Gowri Kumaraguruparan, Ann Chervenak, Anne D Lewis, Dallas M Hyde, Carl Kesselman
Studies in health technology and informatics 175, 29, 2012

Replica Management in Data Intensive Distributed Science Applications

Ann Chervenak, Robert Schuler
Data Intensive Distributed Computing: Challenges and Solutions for Large …, 2012

2011

Applications of the pipeline environment for visual informatics and genomics computations

Ivo D Dinov, Federica Torri, Fabio Macciardi, Petros Petrosyan, Zhizhong Liu, Alen Zamanyan, Paul Eggert, Jonathan Pierce, Alex Genco, James A Knowles, Andrew P Clark, John D Van Horn, Joseph Ames, Carl Kesselman, Arthur W Toga
BMC bioinformatics 12, 1-20, 2011

Infrastructure for sharing standardized clinical brain scans across hospitals

Theo GM Van Erp, Ann L Chervenak, Carl Kesselman, Mike D'Arcy, Janet Sobell, David Keator, Lisa Dahm, Jim Murry, Meng Law, Anton Hasso, Joseph Ames, Fabio Macciardi, Steven G Potkin
2011 IEEE International conference on bioinformatics and biomedicine …, 2011

Health care information systems

C Kesselman, SG Erberich, F Siebenlist, X Sun, K Czajkowski, ...
US Patent App. 12/845,599, 2011

The history of the grid

Ian Foster, Carl Kesselman
High Performance Computing: From Grids and Clouds to Exascale, 3-30, 2011

Enabling collaborative research using the biomedical informatics research network (BIRN)

Karl G Helmer, Jose Luis Ambite, Joseph Ames, Rachana Ananthakrishnan, Gully Burns, Ann L Chervenak, Ian Foster, Lee Liming, David Keator, Fabio Macciardi, Ravi Madduri, John-Paul Navarro, Steven Potkin, Bruce Rosen, Seth Ruffins, Robert Schuler, Jessica A Turner, Arthur Toga, Christina Williams, Carl Kesselman, Biomedical Informatics Research Network
Journal of the American Medical Informatics Association 18 (4), 416-422, 2011

A Data Management Framework for Distributed Biomedical Research Environments. e-Science Workshops

Rajkumar Kettimuthu, Robert Schuler, David Keator, Martin Feller, Dingying Wei, Michael Link, Lee Liming, Joseph Ames, Ann Chervenak, Ian Foster, Carl Kesselman
2010 Sixth IEEE International Conference on, 2011

2010

Designing a robust and cost-effective screening strategy for Diabetic Retinopathy using simulation coupled with Design of Experiments

I Vidyanti, S Wu, C Kesselman
2010 IEEE International Conference on Industrial Engineering and Engineering …, 2010

Montage: An astronomical image mosaicking toolkit

Joseph C Jacob, Daniel S Katz, G Bruce Berriman, John Good, Anastasia C Laity, Ewa Deelman, Carl Kesselman, Gurmeet Singh, Mei-Hui Su, Thomas A Prince, Roy Williams
Astrophysics Source Code Library, ascl: 1010.036, 2010

Two-level Modeling for Economic Evaluation of Diabetic Retinopathy Telescreening

Irene Vidyanti, Shinyi Wu, Carl Kesselman
IIE Annual Conference. Proceedings, 1, 2010

A data management framework for distributed biomedical research environments

Rajkumar Kettimuthu, Robert Schuler, David Keator, Martin Feller, Dingying Wei, Michael Link, John Bresnahan, Lee Liming, Joseph Ames, Ann Chervenak, Ian Foster, Carl Kesselman
2010 Sixth IEEE International Conference on e-Science Workshops, 72-79, 2010

Earth system grid center for enabling technologies: Building a global infrastructure for climate change research

Dean N Williams, J Ahrens, R Ananthakrishnan, G Bell, S Bharathi, D Brown, M Chen, AL Chervenak, L Cinquini, R Drach, IT Foster, P Fox, S Hankin, D Harper, N Hook, P Jones, DE Middleton, R Miller, E Nienhouse, R Schweitzer, R Schuler, G Shipman, A Shoshani, F Siebenlist, A Sim, WG Strand, F Wang, H Wilcox, N Wilhelmi
Lawrence Livermore National Lab.(LLNL), Livermore, CA (United States), 2010

SciDAC's Earth System Grid Center for Enabling Technologies Semi-Annual Progress Report for the Period October 1, 2009 through March 31, 2010

Dean N Williams, IT Foster, DE Middleton, R Ananthakrishnan, F Siebenlist, A Shoshani, A Sim, G Bell, R Drach, J Ahrens, P Jones, D Brown, J Chastang, L Cinquini, P Fox, D Harper, N Hook, E Nienhouse, G Strand, P West, H Wilcox, N Wilhelmi, S Zednik, S Hankin, R Schweitzer, D Bernholdt, M Chen, R Miller, G Shipman, F Wang, S Bharathi, A Chervenak, R Schuler, M Su
Lawrence Livermore National Lab.(LLNL), Livermore, CA (United States), 2010

2009

An end-to-end framework for provisioning-based resource and application management

Gurmeet Singh, Carl Kesselman, Ewa Deelman
IEEE Systems Journal 3 (1), 25-48, 2009