Publications
2015
A system to build distributed multivariate models and manage disparate data sharing policies: implementation in the scalable national network for effectiveness research
Daniella Meeker, Xiaoqian Jiang, Michael E Matheny, Claudiu Farcas, Michel D’Arcy, Laura Pearlman, Lavanya Nookala, Michele E Day, Katherine K Kim, Hyeoneui Kim, Aziz Boxwala, Robert El-Kareh, Grace M Kuo, Frederic S Resnic, Carl Kesselman, Lucila Ohno-Machado
Journal of the American Medical Informatics Association 22 (6), 1187-1195, 2015
2014
Adaptation and policy-based resource allocation for efficient bulk data transfers in high performance computing environments
Ann L Chervenak, Alex Sim, Junmin Gu, Robert E Schuler, Nandan Hirpathak
2014 Fourth International Workshop on Network-Aware Data Management, 1-8, 2014
Digital asset management for heterogeneous biomedical data in an era of data-intensive science
Robert E Schuler, Carl Kesselman, Karl Czajkowski
2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2014
Efficient data staging using performance-based adaptation and policy-based resource allocation
Ann L Chervenak, Alex Sim, Junmin Gu, Robert Schuler, Nandan Hirpathak
2014 22nd Euromicro International Conference on Parallel, Distributed, and …, 2014
A neuroinformatics of brain modeling and its implementation in the brain operation database BODB
Michael A Arbib, Anon Plangprasopchok, James Bonaiuto, Robert E Schuler
Neuroinformatics 12 (1), 5-26, 2014
An asset management approach to continuous integration of heterogeneous biomedical data
Robert E Schuler, Carl Kesselman, Karl Czajkowski
Data Integration in the Life Sciences: 10th International Conference, DILS …, 2014
Message from the general chairs and program chairs
Alan Sussman, Liana L Fong, Sik-Sang Yau, Ephraim Feig, Carl Kesselman
IEEE International Conference on Cloud Computing, CLOUD, xix, 2014
pSCANNER: Patient-centered scalable national network for effectiveness research
Lucila Ohno-Machado, Zia Agha, Douglas S Bell, Lisa Dahm, Michele E Day, Jason N Doctor, Davera Gabriel, Maninder K Kahlon, Katherine K Kim, Michael Hogarth, Michael E Matheny, Daniella Meeker, Jonathan R Nebeker, pSCANNER team, Frederic Resnic, Dmitry Khodyakov, Lattice Armstead, Travis Nagler, Sam Morley, Nicholas Anderson, Dan Cooper, Dan Phillips, David Heber, Zhaoping Li, Michael K Ong, Ayan Patel, Marianne Zachariah, Jane C Burns, Lori B Daniels, Son Doan, Claudiu Farcas, Rita Germann-Kurtz, Xiaoqian Jiang, Hyeon-eui Kim, Paulina Paul, Howard Taras, Adriana Tremoulet, Shuang Wang, Wenhong Zhu, Douglas Berman, Angela Rizk-Jackson, Mike D’Arcy, Carl Kesselman, Tara Knight, Laura Pearlman, Paul Heidenreich, Dena Rifkin, Carl Stepnowsky, Tania Zamora, Scott L DuVall, Lewis J Frey, Jeffrey Scehnet, Brian C Sauer, Julio C Facelli, Ram K Gouripeddi, Jason Denton, Fern FitzHenry, James Fly, Vincent Messina, Freneka Minter, Lalit Nookala, Heidi Sullivan, Theodore Speroff, Dax Westerman
Journal of the American Medical Informatics Association 21 (4), 621-626, 2014
Closing Panel| Collaborative Approaches to Generating the Evidence We Need in Healthcare
Basit Chaudhry, Brian Bot, Philip RO Payne, S George Djorgovski, Carl Kesselman
2014
2013
A physical sciences network characterization of non-tumorigenic and metastatic cells
Scientific reports 3 (1), 1449, 2013
Physical Sciences-Oncology Centers Network
DB Agus, JF Alexander, W Arap, S Ashili, JE Aslan, RH Austin, V Backman, KJ Bethel, R Bonneau, WC Chen, C Chen-Tanyolac, NC Choi, SA Curley, M Dallas, D Damania, PC Davies, P Decuzzi, L Dickinson, L Estevez-Salmeron, V Estrella, M Ferrari, C Fischbach, J Foo, SI Fraley, C Frantz, A Fuhrmann, P Gascard, RA Gatenby, Y Geng, S Gerecht, RJ Gillies, B Godin, WM Grady, A Greenfield, C Hemphill, BL Hempstead, A Hielscher, WD Hillis, EC Holland, A Ibrahim-Hashim, T Jacks, RH Johnson, A Joo, JE Katz, L Kelbauskas, C Kesselman, MR King, K Konstantopoulos, CM Kraning-Rush, P Kuhn, K Kung, B Kwee, JN Lakins, G Lambert, D Liao, JD Licht, JT Liphardt, L Liu, MC Lloyd, A Lyubimova, P Mallick, J Marko, OJ McCarty, DR Meldrum, F Michor, SM Mumenthaler, V Nandakumar, TV O’Halloran, S Oh, R Pasqualini, MJ Paszek, KG Philips, CS Poultney, K Rana, CA Reinhart-King, R Ros, GL Semenza, P Senechal, ML Shuler, S Srinivasan, JR Staunton, Y Stypula, H Subramanian, TD Tlsty, GW Tormoen, Y Tseng, A van Oudenaarden, SS Verbridge, JC Wan, VM Weaver, J Widom, C Will, D Wirtz, J Wojtkowiak, PH Wu
A physical sciences network characterization of non-tumorigenic and …, 2013
2012
A flexible, open, decentralized system for digital pathology networks
Robert Schuler, David E Smith, Gowri Kumaraguruparan, Ann Chervenak, Anne D Lewis, Dallas M Hyde, Carl Kesselman
Studies in health technology and informatics 175, 29, 2012
Replica Management in Data Intensive Distributed Science Applications
Ann Chervenak, Robert Schuler
Data Intensive Distributed Computing: Challenges and Solutions for Large …, 2012
Next generation sequence analysis and computational genomics using graphical pipeline workflows
Federica Torri, Ivo D Dinov, Alen Zamanyan, Sam Hobel, Alex Genco, Petros Petrosyan, Andrew P Clark, Zhizhong Liu, Paul Eggert, Jonathan Pierce, James A Knowles, Joseph Ames, Carl Kesselman, Arthur W Toga, Steven G Potkin, Marquis P Vawter, Fabio Macciardi
Genes 3 (3), 545-575, 2012
A resiliency model for high performance infrastructure based on logical encapsulation
James J Moore, Carl Kesselman
Proceedings of the 21st international symposium on High-Performance Parallel …, 2012
A system architecture for sharing de-identified, research-ready brain scans and health information across clinical imaging centers
Ann L Chervenak, Theo GM Van Erp, Carl Kesselman, Mike D’Arcy, Janet Sobell, David Keator, Lisa Dahm, Jim Murry, Meng Law, Anton Hasso, Joseph Ames, Fabio Macciardi, Steven G Potkin
Studies in health technology and informatics 175, 19, 2012
The Grid: What's Really Going On?
Maxine D Brown¹, Tom DeFanti¹, Carl Kesselman, Jesper Oppelstrup
Simulation and Visualization on the Grid: Parallelldatorcentrum Kungl …, 2012
2011
Enabling collaborative research using the biomedical informatics research network (BIRN)
Karl G Helmer, Jose Luis Ambite, Joseph Ames, Rachana Ananthakrishnan, Gully Burns, Ann L Chervenak, Ian Foster, Lee Liming, David Keator, Fabio Macciardi, Ravi Madduri, John-Paul Navarro, Steven Potkin, Bruce Rosen, Seth Ruffins, Robert Schuler, Jessica A Turner, Arthur Toga, Christina Williams, Carl Kesselman, Biomedical Informatics Research Network
Journal of the American Medical Informatics Association 18 (4), 416-422, 2011
A Data Management Framework for Distributed Biomedical Research Environments. e-Science Workshops
Rajkumar Kettimuthu, Robert Schuler, David Keator, Martin Feller, Dingying Wei, Michael Link, Lee Liming, Joseph Ames, Ann Chervenak, Ian Foster, Carl Kesselman
2010 Sixth IEEE International Conference on, 2011