Publications

Next generation resequencing of soybean germplasm for trait discovery on xsede using pegasus workflows and iplant infrastructure

Abstract

The informatics analysis results help set a strong foundation for handling and analysis of subsequent large scale resequencing efforts in future. The NGS resequencing data represents a rich source of information and can lead to significant discoveries when it comes to mining genotypic data for phenotypic inferences. All data including GWAS, SNP and genome structure information generated from this resequencing project can be accessed through Soybean Knowledge Base (SoyKB) at http://soykb. org.

Date
2014
Authors
Trupti Joshi, Babu Valliyodan, Saad M Khan, Yang Liu, JV Maldonado dos Santos, Yongqing Jiao, Dong Xu, Henry T Nguyen, Nicole Hopkins, Mats Rynge, Nirav Merchant
Volume
2014
Publisher
XSEDE