Publications

This section contains publications published by ISI over the past several decades.

2022

Mining literature-based knowledge graph for predicting combination therapeutics: A covid-19 use case

Ahmed Abdeen Hamed, Jakub Jonczyk, Mohammad Zaiyan Alam, Ewa Deelman, Byung Suk Lee
2022 IEEE International Conference on Knowledge Graph (ICKG), 79-86,  2022

Workflow anomaly detection with graph neural networks

Hongwei Jin, Krishnan Raghavan, George Papadimitriou, Cong Wang, Anirban Mandal, Patrycja Krawczuk, Loïc Pottier, Mariam Kiran, Ewa Deelman, Prasanna Balaprakash
2022 IEEE/ACM Workshop on Workflows in Support of Large-Scale Science (WORKS …,  2022

Co-scheduling ensembles of in situ workflows

Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira Da Silva, Frédéric Suter, Silvina Caíno-Lores, Michela Taufer, Ewa Deelman
2022 IEEE/ACM Workshop on Workflows in Support of Large-Scale Science (WORKS …,  2022

SIM-SITU: A Framework for the Faithful Simulation of in situ Processing

Valentin Honoré, Tu Mai Anh Do, Loïc Pottier, Rafael Ferreira Da Silva, Ewa Deelman, Frédéric Suter
2022 IEEE 18th International Conference on e-Science (e-Science), 182-191,  2022

Molecular dynamics workflow decomposition for hybrid classic/quantum systems

Sandeep Suresh Cranganore, Vincenzo De Maio, Ivona Brandic, Tu Mai Anh Do, Ewa Deelman
2022 IEEE 18th International Conference on e-Science (e-Science), 346-356,  2022

Fair sharing of network resources among workflow ensembles

George Papadimitriou, Eric Lyons, Cong Wang, Komal Thareja, Ryan Tanaka, Paul Ruth, Ivan Rodero, Ewa Deelman, Michael Zink, Anirban Mandal
Cluster Computing, 1-19,  2022

Broadening Student Participation in Cyberinfrastructure Research and Development

Angela Patricia Murillo, Ewa Deelman, Jarek Nabrzyski, Loïc Pottier
Practice and Experience in Advanced Research Computing, 1-2,  2022

Building the research innovation workforce: Challenges and recommendations from a virtual workshop to advance the research computing community

Thomas Hacker, Preston Smith, Dana Brunson, Lisa Arafune, Thomas Cheatham, Ewa Deelman
Practice and Experience in Advanced Research Computing, 1-7,  2022

Automating edge-to-cloud workflows for science: Traversing the edge-to-cloud continuum with pegasus

Ryan Tanaka, George Papadimitriou, Sai Charan Viswanath, Cong Wang, Eric Lyons, Komal Thareja, Chengyi Qu, Alicia Esquivel, Ewa Deelman, Anirban Mandal, Prasad Calyam, Michael Zink
2022 22nd IEEE International Symposium on Cluster, Cloud and Internet …,  2022

WfCommons: A framework for enabling scientific workflow research and development

Tainã Coleman, Henri Casanova, Loïc Pottier, Manav Kaushik, Ewa Deelman, Rafael Ferreira da Silva
Future generation computer systems 128, 16-27,  2022

Internet Outage Detection using Passive Analysis (Poster Abstract and Poster)

Asma Enayet, John Heidemann
arXiv preprint arXiv:2209.13767,  2022

Towards winoqueer: Developing a benchmark for anti-queer bias in large language models

Virginia K Felkner, Ho-Chun Herbert Chang, Eugene Jang, Jonathan May
arXiv preprint arXiv:2206.11484,  2022

From Fake News to #FakeNews: Mining Direct and Indirect Relationships among Hashtags for Fake News Detection

Xinyi Zhou, Reza Zafarani, Emilio Ferrara
arXiv preprint arXiv:2211.11113,  2022

Large-scale agent-based simulations of online social networks

Goran Murić, Alexey Tregubov, Jim Blythe, Andrés Abeliuk, Divya Choudhary, Kristina Lerman, Emilio Ferrara
Autonomous Agents and Multi-Agent Systems 36 (2), 38,  2022

TILES-2019: A longitudinal physiologic and behavioral data set of medical residents in an intensive care unit

Joanna C Yau, Benjamin Girault, Tiantian Feng, Karel Mundnich, Amrutha Nadarajan, Brandon M Booth, Emilio Ferrara, Kristina Lerman, Eric Hsieh, Shrikanth Narayanan
Scientific Data 9 (1), 536,  2022

Human decision makings on curriculum reinforcement learning with difficulty adjustment

Yilei Zeng, Jiali Duan, Yang Li, Emilio Ferrara, Lerrel Pinto, C-C Jay Kuo, Stefanos Nikolaidis
arXiv preprint arXiv:2208.02932,  2022

GCN-WP -- Semi-Supervised Graph Convolutional Networks for Win Prediction in Esports

Alexander J Bisberg, Emilio Ferrara
2022 IEEE Conference on Games (CoG), 449-456,  2022

The Gift That Keeps on Giving: Generosity is Contagious in Multiplayer Online Games

Alexander J Bisberg, Julie Jiang, Yilei Zeng, Emily Chen, Emilio Ferrara
Proceedings of the ACM on Human-Computer Interaction 6 (CSCW ‘22), 1-22,  2022

Comparative analysis of social bots and humans during the COVID-19 pandemic

Ho-Chun Herbert Chang, Emilio Ferrara
Journal of Computational Social Science, 1409-1425,  2022