Publications

This section contains publications published by ISI over the past several decades.

2019

Exploration of workflow management systems emerging features from users perspectives

Ryan Mitchell, Loїc Pottier, Steve Jacobs, Rafael Ferreira da Silva, Mats Rynge, Karan Vahi, Ewa Deelman
2019 IEEE International Conference on Big Data (Big Data), 4537-4544,  2019

Cyberinfrastructure center of excellence pilot: Connecting large facilities cyberinfrastructure

Ewa Deelman, Anirban Mandal, Valerio Pascucci, Susan Sons, Jane Wyngaard, Charles Vardeman, Steve Petruzza, Ilya Baldin, Laura Christopherson, Ryan Mitchell, Loic Pottier, Mats Rynge, Erik Scott, Karan Vahi, Marina Kogan, Jasmine Mann, Tom Gulbransen, Daniel Allen, David Barlow, Santiago Bonarrigo, Chris Clark, Leslie Goldman, Tristan Goulden, Phil Harvey, David Hulsander, Steve Jacobs, Christine Laney, Ivan Lobo-Padilla, Jeremy Sampson, John Staarmann, Steve Stone
2019 15th International Conference on eScience (eScience), 449-457,  2019

Custom execution environments with containers in pegasus-enabled scientific workflows

Karan Vahi, Mats Rynge, George Papadimitriou, Duncan A Brown, Rajiv Mayani, Rafael Ferreira Da Silva, Ewa Deelman, Anirban Mandal, Eric Lyons, Michael Zink
2019 15th International Conference on eScience (eScience), 281-290,  2019

Integrity protection for scientific workflow data: Motivation and initial experiences

Mats Rynge, Karan Vahi, Ewa Deelman, Anirban Mandal, Ilya Baldin, Omkar Bhide, Randy Heiland, Von Welch, Raquel Hill, William L Poehlman, F Alex Feltus
Proceedings of the Practice and Experience in Advanced Research Computing on …,  2019

Applicability study of the PRIMAD model to LIGO gravitational wave search workflows

Dylan Chapp, Danny Rorabaugh, Duncan A Brown, Ewa Deelman, Karan Vahi, Von Welch, Michela Taufer
Proceedings of the 2nd International Workshop on Practical Reproducible …,  2019

The evolution of the pegasus workflow management software

Ewa Deelman, Karan Vahi, Mats Rynge, Rajiv Mayani, Rafael Ferreira da Silva, George Papadimitriou, Miron Livny
Computing in Science & Engineering 21 (4), 22-36,  2019

Collaborative circuit designs using the CRAFT repository

Adam Brinckman, Ewa Deelman, Sandeep Gupta, Jarek Nabrzyski, Soowang Park, Rafael Ferreira da Silva, Ian J Taylor, Karan Vahi
Future Generation Computer Systems 94, 841-853,  2019

A Guide for Software Assurance for SWIP

Randy Heiland, Mats Rynge, Karan Vahi, Ewa Deelman, Von Welch

Farm: Architecture for distributed agent-based social simulations

Jim Blythe, Alexey Tregubov
Massively Multi-Agent Systems II: International Workshop, MMAS 2018 …,  2019

Mining news events from comparable news corpora: a multi-attribute proximity network modeling approach

Hyungsul Kim, Ahmed El-Kishky, Xiang Ren, Jiawei Han
2019 IEEE International Conference on Big Data (Big Data), 105-114,  2019

Distantly supervised biomedical named entity recognition with dictionary expansion

Xuan Wang, Yu Zhang, Qi Li, Xiang Ren, Jingbo Shang, Jiawei Han
2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …,  2019

Improving BERT fine-tuning with embedding normalization

Wenxuan Zhou, Junyi Du, Xiang Ren
arXiv preprint arXiv:1911.03918,  2019

Proceedings of the 2nd workshop on deep learning approaches for low-resource nlp (deeplo 2019)

Colin Cherry, Greg Durrett, George Foster, Gholamreza Haffari, Shahram Khadivi, Nanyun Peng, Xiang Ren, Swabha Swayamdipta
Proceedings of the 2nd Workshop on Deep Learning Approaches for Low-Resource …,  2019

HMEAE: Hierarchical modular event argument extraction

Xiaozhi Wang, Ziqi Wang, Xu Han, Zhiyuan Liu, Juanzi Li, Peng Li, Maosong Sun, Jie Zhou, Xiang Ren
Proceedings of the 2019 Conference on empirical methods in natural language …,  2019

Creative industries in China: the digital turn

Terry Flew, Xiang Ren, Yi Wang
A research agenda for creative industries, 164-178,  2019

Refractive-index-insensitive nanolaminated SERS substrates for label-free Raman profiling and classification of living cancer cells

Wonil Nam, Xiang Ren, Seied Ali Safiabadi Tali, Parham Ghassemi, Inyoung Kim, Masoud Agah, Wei Zhou
Nano letters 19 (10), 7273-7281,  2019

Learning Dynamic Context Augmentation for Global Entity Linking

Xiyuan Yang, Xiaotao Gu, Sheng Lin, Siliang Tang, Yueting Zhuang, Fei Wu, Zhigang Chen, Guoping Hu, Xiang Ren
EMNLP 2019,  2019

Reporting the Unreported: Event Extraction for Analyzing the Local Representation of Hate Crimes

Aida Mostafazadeh Davani, Leigh Yeh, Mohammad Atari, Brendan Kennedy, Gwenyth Portillo-Wightman, Elaine Gonzalez, Natalie Delong, Rhea Bhatia, Arineh Mirinjian, Xiang Ren, Morteza Dehghani
arXiv e-prints, arXiv: 1909.02126,  2019

Collaborative Policy Learning for Open Knowledge Graph Reasoning

Cong Fu, Tong Chen, Meng Qu, Woojeong Jin, Xiang Ren
EMNLP 2019,  2019

Facet-aware evaluation for extractive summarization

Yuning Mao, Liyuan Liu, Qi Zhu, Xiang Ren, Jiawei Han
arXiv preprint arXiv:1908.10383,  2019