Publications
This section contains publications published by ISI over the past several decades.
2021
A simple three-step approach for the automatic detection of exaggerated statements in health science news
Jasabanta Patro, Sabyasachee Baruah
Proceedings of the 16th Conference of the European Chapter of the …, 2021
Using dynamic time warping self-organizing maps to characterize diurnal patterns in environmental exposures
Kenan Li, Katherine Sward, Huiyu Deng, John Morrison, Rima Habre, Meredith Franklin, Yao-Yi Chiang, Jose Luis Ambite, John P Wilson, Sandrah P Eckel
Scientific reports 11 (1), 24052, 2021
Secure neuroimaging analysis using federated learning with homomorphic encryption
Dimitris Stripelis, Hamza Saleem, Tanmay Ghai, Nikhil Dhinagar, Umang Gupta, Chrysovalantis Anastasiou, Greg Ver Steeg, Srivatsan Ravi, Muhammad Naveed, Paul M Thompson, Jose Luis Ambite
17th International Symposium on Medical Information Processing and Analysis …, 2021
NERO: a biomedical named-entity (recognition) ontology with a large, annotated corpus reveals meaningful associations through text embedding
Kanix Wang, Robert Stevens, Halima Alachram, Yu Li, Larisa Soldatova, Ross King, Sophia Ananiadou, Annika M Schoene, Maolin Li, Fenia Christopoulou, José Luis Ambite, Joel Matthew, Sahil Garg, Ulf Hermjakob, Daniel Marcu, Emily Sheng, Tim Beißbarth, Edgar Wingender, Aram Galstyan, Xin Gao, Brendan Chambers, Weidi Pan, Bohdan B Khomtchouk, James A Evans, Andrey Rzhetsky
NPJ systems biology and applications 7 (1), 38, 2021
EPS: automated feature selection in case–control studies using extreme pseudo-sampling
Ruhollah Shemirani, Stephane Wenric, Eimear Kenny, José Luis Ambite
Bioinformatics 37 (19), 3372-3373, 2021
W-TSS: A Wavelet-Based Algorithm for Discovering Time Series Shapelets
Kenan Li, Huiyu Deng, John Morrison, Rima Habre, Meredith Franklin, Yao-Yi Chiang, Katherine Sward, Frank D Gilliland, José Luis Ambite, Sandrah P Eckel
Sensors 21 (17), 5801, 2021
Membership inference attacks on deep regression models for neuroimaging
Umang Gupta, Dimitris Stripelis, Pradeep K Lam, Paul Thompson, José Luis Ambite, Greg Ver Steeg
Medical Imaging with Deep Learning, 228-251, 2021
Selecting Clustering Algorithms for IBD Mapping
Ruhollah Shemirani, Gillian M Belbin, Keith Burghardt, Kristina Lerman, Christy L Avery, Eimear E Kenny, Christopher R Gignoux, José Luis Ambite
bioRxiv.08. 11.456036, 2021
Rapid detection of identity-by-descent tracts for mega-scale datasets
Ruhollah Shemirani, Gillian M Belbin, Christy L Avery, Eimear E Kenny, Christopher R Gignoux, José Luis Ambite
Nature communications 12 (1), 3546, 2021
Toward a fine-scale population health monitoring system
Gillian M Belbin, Sinead Cullina, Stephane Wenric, Emily R Soper, Benjamin S Glicksberg, Denis Torre, Arden Moscati, Genevieve L Wojcik, Ruhollah Shemirani, Noam D Beckmann, Ariella Cohain, Elena P Sorokin, Danny S Park, Jose-Luis Ambite, Steve Ellis, Adam Auton, Erwin P Bottinger, Judy H Cho, Ruth JF Loos, Noura S Abul-Husn, Noah A Zaitlen, Christopher R Gignoux, Eimear E Kenny
Cell 184 (8), 2068-2083. e11, 2021
Scaling neuroscience research using federated learning
Dimitris Stripelis, José Luis Ambite, Pradeep Lam, Paul Thompson
2021 IEEE 18th international symposium on biomedical imaging (ISBI), 1191-1195, 2021
Semi-synchronous federated learning
Dimitris Stripelis, José Luis Ambite
arXiv preprint arXiv:2102.02849, 2021
3D Convolutional Neural Networks for Classification of Alzheimer's and Parkinson's Disease with T1-Weighted Brain MRI
Paul M. Thompson. Nikhil J. Dhinagar, Sophia I. Thomopoulos, Conor Owens-Walton, Dimitris Stripelis, Jose Luis Ambite, Greg Ver Steeg, Daniel Weintraub, Philip Cook, Corey McMillan
17th International Symposium on Medical Information Processing and Analysis …, 2021
Structure aware experience replay for incremental learning in graph-based recommender systems
Kian Ahrabian, Yishi Xu, Yingxue Zhang, Jiapeng Wu, Yuening Wang, Mark Coates
CIKM 2021, 2021
Understanding population annealing Monte Carlo simulations
Martin Weigel, Lev Barash, Lev Shchur, Wolfhard Janke
Physical Review E 103 (5), 053301, 2021
Modeling unsteady Bénard-Marangoni instabilities in drying volatile droplets on a heated substrate
AA Gavrilina, L Yu Barash
Journal of Experimental and Theoretical Physics 132, 302-312, 2021
Fluid flow structures in an evaporating sessile droplet depending on the droplet size and properties of liquid and substrate
MN Turchaninova, ES Melnikova, AA Gavrilina, L Yu Barash
Journal of Physics: Conference Series 1730 (1), 012029, 2021
La Jument: Student Created CubeSat for Remote Sensing and Software Testing
Eugene Park, David Barnhart, David Gutierrez, Eva Prestamo, Morgan Farrier, Spencer Wedel, Stephen Hunt
Sensor Fusion Kalman Filtering for Stability and Control of Satellite Swarms
Rahul Rughani, David A Barnhart
16th International Conference on Space Operations, Cape Town, South Africa-3 …, 2021
Fun-SAT: Functional corruptibility-guided SAT-based attack on sequential logic encryption
Yinghua Hu, Yuke Zhang, Kaixin Yang, Dake Chen, Peter A Beerel, Pierluigi Nuzzo
2021 IEEE International Symposium on Hardware Oriented Security and Trust …, 2021