Publications

This section contains publications published by ISI over the past several decades.

2021

EPS: automated feature selection in case–control studies using extreme pseudo-sampling

Ruhollah Shemirani, Stephane Wenric, Eimear Kenny, José Luis Ambite
Bioinformatics 37 (19), 3372-3373,  2021

W-TSS: A Wavelet-Based Algorithm for Discovering Time Series Shapelets

Kenan Li, Huiyu Deng, John Morrison, Rima Habre, Meredith Franklin, Yao-Yi Chiang, Katherine Sward, Frank D Gilliland, José Luis Ambite, Sandrah P Eckel
Sensors 21 (17), 5801,  2021

Membership inference attacks on deep regression models for neuroimaging

Umang Gupta, Dimitris Stripelis, Pradeep K Lam, Paul Thompson, José Luis Ambite, Greg Ver Steeg
Medical Imaging with Deep Learning, 228-251,  2021

Selecting Clustering Algorithms for IBD Mapping

Ruhollah Shemirani, Gillian M Belbin, Keith Burghardt, Kristina Lerman, Christy L Avery, Eimear E Kenny, Christopher R Gignoux, José Luis Ambite
bioRxiv.08. 11.456036,  2021

Rapid detection of identity-by-descent tracts for mega-scale datasets

Ruhollah Shemirani, Gillian M Belbin, Christy L Avery, Eimear E Kenny, Christopher R Gignoux, José Luis Ambite
Nature communications 12 (1), 3546,  2021

Toward a fine-scale population health monitoring system

Gillian M Belbin, Sinead Cullina, Stephane Wenric, Emily R Soper, Benjamin S Glicksberg, Denis Torre, Arden Moscati, Genevieve L Wojcik, Ruhollah Shemirani, Noam D Beckmann, Ariella Cohain, Elena P Sorokin, Danny S Park, Jose-Luis Ambite, Steve Ellis, Adam Auton, Erwin P Bottinger, Judy H Cho, Ruth JF Loos, Noura S Abul-Husn, Noah A Zaitlen, Christopher R Gignoux, Eimear E Kenny
Cell 184 (8), 2068-2083. e11,  2021

Scaling neuroscience research using federated learning

Dimitris Stripelis, José Luis Ambite, Pradeep Lam, Paul Thompson
2021 IEEE 18th international symposium on biomedical imaging (ISBI), 1191-1195,  2021

Semi-synchronous federated learning

Dimitris Stripelis, José Luis Ambite
arXiv preprint arXiv:2102.02849,  2021

3D Convolutional Neural Networks for Classification of Alzheimer's and Parkinson's Disease with T1-Weighted Brain MRI

Paul M. Thompson. Nikhil J. Dhinagar, Sophia I. Thomopoulos, Conor Owens-Walton, Dimitris Stripelis, Jose Luis Ambite, Greg Ver Steeg, Daniel Weintraub, Philip Cook, Corey McMillan
17th International Symposium on Medical Information Processing and Analysis …,  2021

Structure aware experience replay for incremental learning in graph-based recommender systems

Kian Ahrabian, Yishi Xu, Yingxue Zhang, Jiapeng Wu, Yuening Wang, Mark Coates
CIKM 2021,  2021

Understanding population annealing Monte Carlo simulations

Martin Weigel, Lev Barash, Lev Shchur, Wolfhard Janke
Physical Review E 103 (5), 053301,  2021

Modeling unsteady Bénard-Marangoni instabilities in drying volatile droplets on a heated substrate

AA Gavrilina, L Yu Barash
Journal of Experimental and Theoretical Physics 132, 302-312,  2021

Fluid flow structures in an evaporating sessile droplet depending on the droplet size and properties of liquid and substrate

MN Turchaninova, ES Melnikova, AA Gavrilina, L Yu Barash
Journal of Physics: Conference Series 1730 (1), 012029,  2021

La Jument: Student Created CubeSat for Remote Sensing and Software Testing

Eugene Park, David Barnhart, David Gutierrez, Eva Prestamo, Morgan Farrier, Spencer Wedel, Stephen Hunt

Sensor Fusion Kalman Filtering for Stability and Control of Satellite Swarms

Rahul Rughani, David A Barnhart
16th International Conference on Space Operations, Cape Town, South Africa-3 …,  2021

Fun-SAT: Functional corruptibility-guided SAT-based attack on sequential logic encryption

Yinghua Hu, Yuke Zhang, Kaixin Yang, Dake Chen, Peter A Beerel, Pierluigi Nuzzo
2021 IEEE International Symposium on Hardware Oriented Security and Trust …,  2021

Analyzing the confidentiality of undistillable teachers in knowledge distillation

Souvik Kundu, Qirui Sun, Yao Fu, Massoud Pedram, Peter Beerel
Advances in Neural Information Processing Systems 34, 9181-9192,  2021

Pipeline parallelism for inference on heterogeneous edge computing

Yang Hu, Connor Imes, Xuanang Zhao, Souvik Kundu, Peter A Beerel, Stephen P Crago, John Paul N Walters
arXiv preprint arXiv:2110.14895,  2021

GF-Flush: A GF (2) Algebraic Attack on Dynamically Secured Scan Chains

Dake Chen, Chunxiao Lin, Peter A Beerel
2021 IEEE International Symposium on Defect and Fault Tolerance in VLSI and …,  2021

A High Performance and Robust FIFO Synchronizer-Interface for Crossing Clock Domains in SFQ Logic

Gourav Datta, Shidie Lin, Peter A Beerel
arXiv preprint arXiv:2108.03719,  2021